MRIQC: individual T1w report

Summary

• Subject ID: 0001.
• Date and time: 2017-11-09, 02:15.
• MRIQC version: 0.9.9.
• Workflow details:
  • Detected a zero-filled frame, has the original image been rotated?
  • File has no metadata (sidecar JSON file missing or empty)
• Image parameters:

  cjv			0.34482967857306995
  cnr			3.7889314245716226
  efc			0.6086038838217745
  fber			10010.4072265625
  fwhm	avg		3.6926666666666663
  fwhm	x		3.61352
  fwhm	y		3.74178
  fwhm	z		3.7227
  icvs	csf		0.19121160080667765
  icvs	gm		0.4440345856629255
  icvs	wm		0.3647538135303969
  inu	med		1.024689793586731
  inu	range		0.26675119996070884
  qi	1		0.00010017678255745433
  qi	2		0.008248896444468853
  rpve	csf		24.759561476547322
  rpve	gm		11.765865030488499
  rpve	wm		16.38817529303219
  size	x		192
  size	y		256
  size	z		256
  snr	csf		2.593452313956071
  snr	gm		15.55504840416507
  snr	total		15.053099372096922
  snr	wm		27.010797398169622
  snrd	csf		59.72020503274947
  snrd	gm		119.3948353143759
  snrd	total		111.73287560315362
  snrd	wm		156.08358646233546
  spacing	x		1.0
  spacing	y		1.0
  spacing	z		1.0
  summary	bg	k	61.69078053724766
  summary	bg	mad	4.197383403778076
  summary	bg	mean	6.684443950653076
  summary	bg	median	5.625187873840332
  summary	bg	n	2323935.0
  summary	bg	p05	0.0
  summary	bg	p95	17.38353939056396
  summary	bg	stdv	7.736506462097168
  summary	csf	k	23.148685978168572
  summary	csf	mad	106.29739379882812
  summary	csf	mean	411.4660339355469
  summary	csf	median	382.6204833984375
  summary	csf	n	28957.0
  summary	csf	p05	265.29863891601565
  summary	csf	p95	609.0055175781248
  summary	csf	stdv	147.5307159423828
  summary	gm	k	0.2583505308401435
  summary	gm	mad	47.166324615478516
  summary	gm	mean	766.6675415039062
  summary	gm	median	764.948974609375
  summary	gm	n	30718.0
  summary	gm	p05	688.3714813232422
  summary	gm	p95	850.715185546875
  summary	gm	stdv	49.17609405517578
  summary	wm	k	0.6949058843504874
  summary	wm	mad	33.889549255371094
  summary	wm	mean	1000.7926025390625
  summary	wm	median	1000.0095825195312
  summary	wm	n	232075.0
  summary	wm	p05	940.8314270019532
  summary	wm	p95	1062.5668823242186
  summary	wm	stdv	37.02250671386719
  tpm	overlap	csf	0.23672235012054443
  tpm	overlap	gm	0.5059142112731934
  tpm	overlap	wm	0.5458033084869385
  wm2max			0.4549165315870486

Visual reports

Provenance information

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.